YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84798489, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAQRFLTS MCESSGRWTW TAVVLLGFLI GIVSSYPTSD RTNATSLEKR WEKLFSRSVL  60
   61 GISVEKSDLN WESDYLLGIK RVRRLYCNVG IGFHLQVLPD GRINGVHNEN QYSLIEISAV 120
  121 ERGVVSLYGV KSGLFVAMSS RGRLYGTRAF RDECKFKETL LPNNYNAYES SIYKGFYMAL 180
  181 SKHGRLKRGY KASPAMTVTH FLPRL

Type	Start	End	Confidence
Cytoplasmic	1	15	0.80
Transmembrane Helix	16	36	0.79
Non-Cytoplasmic	37	205	0.93