YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58534457, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNDKLTKS DKLASDILKE VADTNNNDSD KVTLFDIKTA LHERGFGILI IIFSLPLSVP  60
   61 IPVPPGYTTI LSIPLILFSL QLLFGFDSPW MPSWLERKSF QRSTLALVVE KTSPALKKIE 120
  121 KFMRPRMSFI FYGPGEKILA FIMLLCALSI ALPLPLTNFI PAIGTTLISL GIMSKDGFLS 180
  181 ILGVLISLCG LLLTLVVVVK GPQLIIGAFS FLKSFVYG

Type	Start	End	Confidence
Cytoplasmic	1	44	0.94
Transmembrane Helix	45	63	0.89
Non-Cytoplasmic	64	69	0.69
Transmembrane Helix	70	90	0.89
Cytoplasmic	91	132	0.88
Transmembrane Helix	133	157	0.79
Non-Cytoplasmic	158	177	0.64
Transmembrane Helix	178	199	0.91
Cytoplasmic	200	218	0.70