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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58534654, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISKRSLLLI LCLAITGCNM DCVEPGLQSK NTSVNVDVPV RKADKIHWVD SGQVISQGEK  60
   61 IKFTLDGSVN FCPFKEDKNP RKVLVPASFC ADGSEPNYSK AADINSVPNN YGVNESKNEL 120
  121 CGGKGFGSNR RYVDTGIKVN PGDKLSFSLV PRKITIDYDN PEGKGINFDD NCYKAVENDR 180
  181 KETVYKKATV SEVHQGGEFF CDGKDGTKNK IQFLPLDKTK AKESKVLVGN GYTPYDNKVH 240
  241 FNKGYIQDNE PWVYGSLLDL RRAKIGLNEL CDGKNCSLDE RKKYSSYELN CYHQNICYTE 300
  301 KGIWNYGLGQ AGERNCVSSI RYKKYDKGNK CDMYSYLEKM EGNVKAGSFT EDDKSWAEAL 360
  361 VAKIGDPDDK NTAKGIQCLP KKEGAKGDNM CSQIGDNNKF EDFSLELNND YPVNDEVTPG 420
  421 SSVMLAIADY GHYYYNRGGY HVKVTRSCEY INGEKLYVYL GDEPPKDLHG VGTNDFKVVG 480
  481 VRERVNGKDE YTILDVISGE HFQNEESKKI YFGINVSNVE RDDITDKNGK YYENNKYTVT 540
  541 LFVKRKINDF ISSNVNGVFK LIKEEVIGDS VKDSYKGYAR GLLQGVRALL TLYVIFTVVG 600
  601 YMLGTIQLSK FDFIVRMFKI AFIAFAFSDR SWELFGTTLS RLFIDGSTYL VDSFSGYVGE 660
  661 GERKFAFLDL TAGVLFTAET WLKFLSLMLS GPFGFIAFWV IFCATYAFLK CIISATFKYV 720
  721 ISTVLVAFLL SLTPLFIVFI LFQKTKPLFD NWIKTLAHVS LEPVILFSFL SLLNQLMYSV 780
  781 LYNLTNFSAC YQCLISVNFL SYDLCLMKSI LPLGYSPGTS VDVALSTGER AGGHFCSITY 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle