YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57506240, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLIEGYLG KSIEGKKSKM PARLDFIQSA SGLFLGLFMW LHMLFVSTIL VSEDFFNSVV  60
   61 HFLELKFVYD NPIMSYITSF LAACVLIIFI VHAGLAMRKF PINFRQYQLL RTHTKKMKHE 120
  121 DTTLWWVQAF TGFVMFFLGS AHLIFIITNA DKISGDMSGE RVINHFMWLF YVVLLICVEL 180
  181 HGSIGLYRLC VKWGWFEGKN AKESRKKLKM AKWLISVFFL VLGVLSLAAF AKIGFENYQN 240
  241 QAQSAMIKTY NGANYEYTI

Type	Start	End	Confidence
Cytoplasmic	1	25	0.96
Transmembrane Helix	26	46	0.88
Non-Cytoplasmic	47	72	0.87
Transmembrane Helix	73	96	0.89
Cytoplasmic	97	123	0.95
Transmembrane Helix	124	146	0.95
Non-Cytoplasmic	147	166	0.94
Transmembrane Helix	167	190	0.93
Cytoplasmic	191	210	0.95
Transmembrane Helix	211	231	0.95
Non-Cytoplasmic	232	259	0.94