YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222824123, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQAKTKTKI PILTIAGSDC SGGAGLQADL KTFSAHNLFG MSVVLSVVAE NTARVISCFD  60
   61 IPTKIIDEQM LAIYEDIEPK AVKIGMLGSK EIITCVKENL LKFQSKNIVI DPVMFAKNGY 120
  121 ALMPLENCQF FKDEILSLAD VLTPNIPEAE FLCDFKILNE EDMKKAAIKL FELGAKSVLI 180
  181 KGGHNEKNTD DIFYDGKEFS IFKGEKINTK NTHGTGCTLS SAIASNLALG KNKHEAIKLA 240
  241 KEYVYNAILH SLELGKGCGP TNHFFKFDEE

Type	Start	End	Confidence
Signal Peptide	1	22	0.70
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.98