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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57018869, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYGSSWFGF IQLILGINLL AALFKYKMFN KKKIPLLIFH ISFLFILLGS AMTRYMGFEG  60
   61 NLHIRENEKN NIIETSKSYI YIATLKDDKV YSASKSEYIA TLPFVNDFSF DLILPDEKAQ 120
  121 IAYENLILDA KEVFIDDNNS APLLSLMLSQ NNESKELLFQ AGDIENISGI NIAFLNDSVP 180
  181 SPYIKIDKEL KLSADFDLKY MSMSDGKENI LKANQKAQAK DLRLYSFNDI NLVVKFASLH 240
  241 GKKTLEGINQ AQDESFFTWF KNSWIELGRN ALISLFGEAK YWNNSLLNNF KDFAQSTKYM 300
  301 PTQLSDNAIN ALKLKLSYKG ESKEVFLVEY NSPIRIDVAG QPFFLRWGPK GIEMPFEMYL 360
  361 KDFELERYPG SMSPMSYASY VEIDNANKKL EYKIFMNNVL DYEGYRFYQS SYDQDELGTI 420
  421 LSVNKDPGKI PTYIGYFLLT LGMFLNVLNP HSRFRTLAKL INQDTLKKTS AILAFILVLF 480
  481 TGQNTYANEP IKVDEAHAKE LASLIVQKPD GRMVPFNTLA MEVLEKIHKT TTFQGQSAEA 540
  541 TIISMIFDGS AWYDKDIIFM PSSRLVNEEI SKILEIEPRA YTSFKDFFTT DSYKLQKYVE 600
  601 NANRKNPNRR SVFDKEIIKL DERVNIVNLI FSGDIFRFIP LQNSTNNQWV APREAYIGLK 660
  661 GEEGVEVKSI LENYFNAVSN SIIHNNWDEA TKNLNAIKNY QEKYGHEVMP SAKKINTEIF 720
  721 FNKSQIFLNL TPLYLCAGFL LLIIVFIKML LPKIRIDFIF KCVYVFNIVA FFIHTLGLAL 780
  781 RWYIAGRAPW SNAYESMVYI AWALSLSGIF FSRKSPIALS LTSILAGVTL GVAHLSQMDP 840
  841 QITNLVPVLQ SYWLTIHVSV ITASYGFLGL CALLGIFVLV LFCMLKNNGK HNENILRNIT 900
  901 EATRINEMAM ILGLCLLTVG NFLGAIWANE SWGRYWSWDS KETWALISIL VYAAILHIRM 960
  961 VPKWANQYTF ALCSMFAYWV IIMTYFGVNY FLTGMHSYAA GDSVKIPDYV YWGFLFMVAL1020
 1021 SIASYFKKSY AKKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle