YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57018836, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGDIIDFLL ALAKDWGYWG IIFLMFVESS FFPFPSEVVM IPAGYLAHQN ELNFWLCLLC  60
   61 GTFGALLGAL LNYYLCYFLG REVLLKICKY FGVNEAKFAQ FEAFFNKHGE ISTFSGRLIP 120
  121 GLRQYISLPA GLARMNLKKF IFYTSLGAGI WCLILLILGY VLGKNEDLIK EYLHFVIIAC 180
  181 IIFATMIVAI YIYIQKRKKI S

Type	Start	End	Confidence
Cytoplasmic	1	15	0.94
Transmembrane Helix	16	35	0.92
Non-Cytoplasmic	36	53	0.84
Transmembrane Helix	54	76	0.94
Cytoplasmic	77	139	0.98
Transmembrane Helix	140	162	0.94
Non-Cytoplasmic	163	171	0.91
Transmembrane Helix	172	194	0.94
Cytoplasmic	195	201	0.96