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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57019719, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIIKSVGD LRISIVLFLL FALSCGLATF IESAYGTPTA WAMVYDSFWF EYIQLLLGIN  60
   61 LLFGMFRYKM FALKKMPLMI FHFSFLFILL GSAMTRYGGF EGLLAIREHT QNALVESSKT 120
  121 SLRISTIKDG ERYTSVNDRY IGNLPFANSF KLNLNMGDEK AVLKYENLIL DADYTYKEDN 180
  181 VSSPLLVLTI SEKKSQGANL EFRSGEVQNI NGINFAFMND DVAKPYIKID KNLKLSSSEN 240
  241 LSVFNMKKGE NSTLKIGEKA DAKDLRLYSL DNLNFVVKFA SLHGAQEIQG VNRPQDESFW 300
  301 LWFKSAWLEF ARTIMISSFG EPQNWKASWL TNFKDFAMSK DYQALELKGA HALKLQLDYK 360
  361 NESKEFYVFE YNKPTVVELA GQKFFISWAL AYEQLPFEIY LRDFVIDRYP GSMSPASYAS 420
  421 EITVKNNEDN FDYRIFMNNV LDYKGYRFYQ SSYDQDEKGT ILSVNKDPGK IPTYIGYFLL 480
  481 CLGMFLNFLN PHSRFRTLAR LINKDALKHT ASVLALFVAL FGADKMLAQD LNISLEQNIP 540
  541 IVDKAHVKEL KALIVQKSVD GRMIPFDTLA REILEKIHKS ADYKGQEASA IMLSMLINVD 600
  601 LWQNEAFILM PSNKNVREAI AEILEISPEL KYVKYKDFFD ANNRYKLQKY VENANRKNPN 660
  661 ARGVFDKEII YLDERANVVN LVFSGELFKF IPIQNHDNNA WLAPFSAITT LKDEEGQFVF 720
  721 TLIKNYFSSV DSAFHDGNWT RANEALGFIK QYQEKIGHEV MPNKTKVEME IFSNKAEIFV 780
  781 KLAPVYLIAG FLLLIVLLIK MVAPKLKISL IFKVIYILNI LAFIVHTVGL GLRAYLADHA 840
  841 PWSNGYESMV YIAWALSLSG IFFSRKSPIA LSLTSILAGI VLAVAHLSEM NPQITNLMPV 900
  901 LNSYWLSIHV SVITASYGFL GLCSLLGIFT LLLMCFLKEN NQYNQSILRN ITEATRINEM 960
  961 SMIFGLCLLT VGNFLGAIWA NESWGRYWSW DPKETWALVS ILVYAAILHI RMIPKYSNQF1020
 1021 TFALWSMFAY WVVIMTYFGV NYFLVGLHSY AAGEAAQIPS YVYWGVVIMI VLALLARRKR1080
 1081 EFVGKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle