YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57020052, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELIEGYLG KSIDGKKSKM PAKLDFIQSA SGLFLGLFMW VHMVFVSTIL VSKDFFNSVV  60
   61 HFLELKFIYN DPMMSYITSF LAACVLVVFF VHALLAMRKF PINFRQYQIL RTHAKKMNHG 120
  121 DTSLWLVQAF TGFVMFFLGS AHLIFVITNG DKISADMSGD RVINHFMWLF YIALLICVEL 180
  181 HGSIGLYRLC VKWGWFEAKD VKDIRKSRKK LKMAKWIISI FFLVLGVLSL AAFAKIGFEN 240
  241 YQSQTTAMVK TYNGANYEYS I

Type	Start	End	Confidence
Cytoplasmic	1	25	0.97
Transmembrane Helix	26	51	0.81
Non-Cytoplasmic	52	75	0.92
Transmembrane Helix	76	96	0.94
Cytoplasmic	97	123	0.93
Transmembrane Helix	124	146	0.93
Non-Cytoplasmic	147	166	0.93
Transmembrane Helix	167	190	0.89
Cytoplasmic	191	213	0.94
Transmembrane Helix	214	234	0.95
Non-Cytoplasmic	235	261	0.94