YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57020339, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAKGSDLIP VLSIAGSDCS GGAGIQADLK TFSAHNLFGM SVVLSVVAEN TARVISVHDI  60
   61 PAQSVDEQML AVFEDIVPKA TKIGMIGTCE LMECVARNLE KFKPQNIVID PVMFAKNGFA 120
  121 LMPQENCDFF KKTIVKFADI LTPNIPEAEF LCDFKIKNEE DMIKAAKYLC TQGAKAVLLK 180
  181 GGHSEENAND VLFDGNEIFI LKGERIETKN THGTGCTFSS AIASNLALGK DLYNAVSEAK 240
  241 EYVRNAIYYS LNLGKGCGPT NHFFRFLNEK

Type	Start	End	Confidence
Signal Peptide	1	21	0.75
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	270	0.99