YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88193382
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNISTINWV FVCGLSFCLG GIAVLSLMPL GSDCVCPLSN PLAKFAGEGG VTVIKKEAAD  60
   61 EKQPQPHDHG ASAHKMALLV PFRDRFEELL QFVPHMTAFL KRQGVAHHIF VLNQVDRFRF 120
  121 NRASLINVGF QFASDEYDYI AMHDVDLLPL NDNLHYEYPS SLGPLHIAGP KLHPKYHYDN 180
  181 FVGGILLVRR EHFKQMNGMS NQYWGWGLED DEFFVRIRDA GLQVTRPQNI KIGSTDTFSH 240
  241 IHNRHHRKRD TQKCFNQKEM TRKRDHKTGL DNVKYKILKV HEMLIDQVAV TILNILLDCD 300
  301 VNKTPWCDCS GTAAAASAVQ T

Type	Start	End	Confidence
Signal Peptide	1	26	0.50
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	321	0.96