YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39454
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRVALPTTA SAIPRSISTS PGETISKNHE EEVKRVWRKA DAVCFDVDST VCQDEGIDEL  60
   61 AAYLGVGEAV ANVTRTAMNG NARFRYRDAL AARLQVMKPN HEQLEQFVNI SKPKLTVGIR 120
  121 ELVSRLHARG THVYLVSGGF RRLILPVAEL LGIEKSRIYA NEILFDKFGK YHGFDTSELT 180
  181 SDSGSKETGK PAVIALLKKM YNYKTVVMVG DGATDVEASP PADAFIGFGG NVIREGVKAR 240
  241 AKWYVTDFDV LRKDLDHDES DIDDE

Type	Start	End	Confidence
Signal Peptide	1	18	0.57
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	265	0.99