YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PLPP4_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRELAIEIGV RALLFGVFVF TEFLDPFQRV IQPEEIWLYK NPLVQSDNIP TRLMFAISFL  60
   61 TPLAVICVVK IIRRTDKTEI KEAFLAVSLA LALNGVCTNT IKLIVGRPRP DFFYRCFPDG 120
  121 VMNSEMRCTG DPDLVSEGRK SFPSIHSSFA FSGLGFTTFY LAGKLHCFTE SGRGKSWRLC 180
  181 AAILPLYCAM MIALSRMCDY KHHWQDSFVG GVIGLIFAYI CYRQHYPPLA NTACHKPYVS 240
  241 LRVPTSLKKE ERPTADSAPS LPLEGITEGP V

Type	Start	End	Confidence
Cytoplasmic	1	7	0.92
Transmembrane Helix	8	27	0.86
Non-Cytoplasmic	28	51	0.89
Transmembrane Helix	52	72	0.94
Cytoplasmic	73	82	0.93
Transmembrane Helix	83	104	0.93
Non-Cytoplasmic	105	144	0.93
Transmembrane Helix	145	163	0.91
Cytoplasmic	164	175	0.75
Transmembrane Helix	176	195	0.93
Non-Cytoplasmic	196	202	0.76
Transmembrane Helix	203	222	0.88
Cytoplasmic	223	271	0.93