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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124487275, gi...
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKKFSGLE ISLIVLFIIV TIIAIALVVV LATKVPAVEE VKSPTSTPSP GRCPPEQGEP  60
   61 LNERINCIPE QHPTKAKCEE RGCCWRPWNN TIIPWCFFAD NHGYTAASVT NDNSGLKATL 120
  121 SRIPSPTLFG EDIKSVLLTT QSQTRNRFRF KLTDPNNKRY EVPHQFVKDG NGIPAADTLY 180
  181 DVKVSENPFS IKVIRKSNNK VLFDTSIGPL VYSNQYLQIS TRLPSEYIYG FGEHIHKRFR 240
  241 HDLYWKTWPI FTRDEIPGDN NHNLYGHQTF FMGIEDNSGK SYGVFLMNSN AMEVFIQPTP 300
  301 IITYRVTGGV LDFYIFLGDT PEQVVQQYQE LIGRPAMPAY WNLGFQLSRW NYVSLDKVKE 360
  361 VVRRNREAGI PYDAQVTDID YMEDKKDFTY DEVAFKGLPE FAQDLHNHGQ KYIIILDPAI 420
  421 SINKRANGAE YQTYVRGNEQ NVWVKESDGT TSLIGEVWPG LTVYPDFTNP RTWEWWANEC 480
  481 NLFHQQVEYD GLWIDMNEVS SFIHGSQKGC APNLLNYPPF TPGILDKIMY SKTLCMDAVQ 540
  541 HWGNQYDVHS LYGYSMAIAT EKAVEKVFPN KRSFILTRST FAGSGHHAAH WLGDNTASWE 600
  601 QMEWSITGML EFGMFGMPLV GADICGFLAN TTEELCRRWM QLGAFYPFSR NHNAEGYAEQ 660
  661 DPAFWGADSL LVNTSRHYLT IRYTLLPFLY TLFYRAHAFG ETVARPFLHE FYEDPNSWIE 720
  721 DTQFLWGPAL LITPVLRPET KYVSAYIPDA TWYDYETGEK RPWRKQRVDM YLPEDKIGLH 780
  781 LRGGYIIPTQ QPDVTTTASR KNPLGLIVAL DENQAAKGEL FWDDGESKDT IEKKIYILYE 840
  841 FSVSNNNLIV NCTHSSYPEG NTLVFKTIKV LGLSATVTAV TVGENDQQMN PHLAFTFDAF 900
  901 NKILSITDLT FNLGKTFIVR WTTQSFSDNE KFTCYPDVGT ATEKTCVERG CIWEPVSGLA 960
  961 NVPPCYFPSN HNPYLLTSTQ KLATGITAEL QLNPASARIK LPSNPISTLR VEVKYHKNDM1020
 1021 LQFKIYDAHH KRYEVPVPLN IPDTPTSSEE NRLYDVEIKE NPFGIQVRRR STGKLIWDSC1080
 1081 LPGFAFNDQF IQISTRLPSQ YLYGFGEAEH TAFKRNLNWH TWGMFTRDQP PGYKLNSYGF1140
 1141 HPYYMALEDE GNAHGVLLQN SNGMDVTFQP TPALTYRTIG GILDFYMFLG PTPEGATKQY1200
 1201 HEVIGFPVMP PYWALGFQLC RYGYRNTSEI EQLYNDMKAA QIPYDVQYTD INYMERQLDF1260
 1261 TIGERFKTLP QFVEKIRKEG MKYIVILDPA ISGNETQPYP AFERGIQKDV FVKWPNTNDI1320
 1321 CWAKVWPDLP NITIDETITE DEAVNASRAH VAFPDFFRNS TSEWWTREIY DFYNEKMKFD1380
 1381 GLWIDMNEPS SFVNGTVTNK CRNDTLNYPP YFPELTKRNE GLHFRTMCME TEHILSDGSS1440
 1441 VLHYDVHNLY GWSQVKPTLD ALRNTTGLRG IVISRSTYPT AGRWGGHWLG DNYANWENLE1500
 1501 KSLIGMLEFN LFGIPYVGAD ICGFFNDSEY HLCARWMQVG AFYPYSRNHN IQFTRRQDPV1560
 1561 SWNETFAQMS KKVLEIRYTL LPYFYTQMHE AHIHGGTVIR PLMHEFFDDK ETWEIYKQFL1620
 1621 WGPAFMVTPV IGPFQTAVNG YVPKARWFDY HTGEDIKVRG KLQTFSAPFD TINLHVRGGY1680
 1681 ILPCQEPAQN TYYSRQKYMK LIVAADDNQT AKGTLFWDDG ESIDTYEKNQ YTLIEFNLNQ1740
 1741 KNLTSTVLKD GYRNKSEMKL GSIYVWGKGT TSISQVNLTY GGNEQQLSFT QDEAKEILTI1800
 1801 DLKNVTVTLD EPIQISWS

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