YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83415138, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQKVIPKE ESLHDSWVEL HFDSSNVSEH GEDTPALSDI MDLEKMLLEA QRESSSSSRT  60
   61 SSHCSSPRRV QTPPLINTAV FNTHTIAQGE VVLESKQEAE AVARISDWSS RPENIPPTAF 120
  121 IIKRPKRNRI CNTNTDKDDK EIDRDLLKLL LPSLVLTHIL MLGLGICIGR RLSTQCSTI

Type	Start	End	Confidence
Cytoplasmic	1	148	0.54
Transmembrane Helix	149	169	0.70
Non-Cytoplasmic	170	179	0.66