YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SSRD_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALASLGAL ALLLLSGLSC CSEACVEPQI TPSYYTTSDA VISTETVFIV EISLTCKNRV  60
   61 QNMALYADVS GKQFPVTRGQ DVGRYQVSWS LDHKSAHAGT YEVRFFDEES YSLLRKAQRN 120
  121 NEDVSVIPPL FTVSVDHRGT WNGPWVSTEV LAAAIGLVIY YLAFSAKSHI QA

Type	Start	End	Confidence
Signal Peptide	1	24	0.95
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	172	0.92