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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MANBA_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLHLLFLLA LCGAGCMAAG PSYSLRGSWR VSNGNSSLEL PATVPGYVHS ALQQHGLIQD  60
   61 PYYRFNDLNY RWISLDNWTY STEFKIPFNR SEWQKVKLIF DGVDTVAEIL FNNVTIGKTD 120
  121 NMFTRYSFDV TNVVKDVNSL KLRFQSAVQY AECQSKAHTQ YRVPPECPPV EQKGECHVNF 180
  181 IRKEQCSFSW DWGPSFPSQG IWKDVRIEAY NIAHLDHLTF LPLYDNTSQA WTIEIEASFD 240
  241 VVSTKPVGGQ VTIAIPELKT QQANHIELQH GQRIVKLLVK IRKDVTVETW WPHGHGNQTG 300
  301 YNTTILFALD GGLKIEKAAK VYFRTVQLIE EPITGSPGLS FYFKINGLPI FLKGSNWIPA 360
  361 DSFQDKVTSE LLQLLLQSAV DANMNTLRVW GGGIYEQDEF YALCDELGIM VWQDFMFASA 420
  421 LYPTEPGFLE SVRKEVTYQV RRLKSHPSVI IWSGNNENEV ALRVNWFHVN PRDLGTYIND 480
  481 YVTLYVKTIR EIVLSEDRSR PFIASSPTNG VKTMTEGWIS KDPYSTQYGD MHFYDYFSDC 540
  541 WDWKVFPKAR LVSEYGYQSW PSFSTLQKVS RQEDWSYSSR FSLHRQHHGN GNNEMLHQVQ 600
  601 LHFQLPQRRD PVRAFKDTIY LTQVMQAQCI KTETEFYLRS RSEIVNGEGH TMGALYWQLN 660
  661 DIWQAPSWAS LEYGGKWKML HYFAQRFFAP LLPVGFEDEG VFYVYGVSDL HKDYPTKLTV 720
  721 RLHRWSSQKP LCTFVSLSAV IKAGEAMVLF QMPVSKLLKR CKECTRDTCV VSFYLSTDNE 780
  781 LFSPTNYHFL SSLKDAKGMV KANITVSISQ KGDLFVFDLK SSTSAITPFV WLDVGSIPGR 840
  841 FSDNGFLMIK KELSVLFYPW KPTSKSELQQ AFSVTSLTDL Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle