YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77917544, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGARRLLGA LRLCSSVSCP RPRATAKLRV RDALGVQDAS GECVTVQGWI RSVRSQKEVL  60
   61 FLHVNDGSSL ESLQVVADSS FDSRELAFGS SVQVQGQLVK SQSKRQNVEL KAEKIEVVGT 120
  121 CEAKAFPIKY KERHPLEYLR QYPHLRCRTN ALGSILRVRS EATAAIHSYF KDNGFMHIHT 180
  181 PVLTSNDCEG AGELFQVEPS SKIKVPEENF FDVPAFLTVS GQLHLEVMSG AFTQVFTFGP 240
  241 TFRAENSQSR RHLAEFYMVE AEVSFVESLQ DLMQVMEGLF KATTEMVLSH CPEDVELCHQ 300
  301 FIASGQKDRL EHMLKNNFLI ISYAEAIEIL KQASQNFTFT PKWGVDLQTE HEKYLVRHCG 360
  361 NIPVFVINYP SELKPFYMRE NEDDPQNTEV A

Type	Start	End	Confidence
Signal Peptide	1	26	0.95
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	391	0.99