YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|112421211, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTRVELTG VLDLQNHVNT GVSSSPSRRG ATVSFHNINY SLKMKSGFCK SKSTKKNILI  60
   61 GLNGIMKPGL NAILGATGSG KSSFLDVLAA RKDPAGLSGE VLIDGAPQPP NFKCLSGYVV 120
  121 QDDVVMGTLT VRENLRFSAA LRLPKSIKQR EKDEKVERLI QELGLSKVAD SRVGTQLIRG 180
  181 VSGGERKRTN IGMELIIDPP VLFLDEPTTG LDASTANSVL MLLKKMGNNG RTIILSIHQP 240
  241 RYSIYRLFDS LTLLVGGKLV YHGPAQDALS YFSQIGYTCE PHNNPADFFL DVINGDSSAV 300
  301 TLNKLYEEVD QDQLSSSLKG IEDRLVEEYQ RSSIFQQTHA DLQRIVQGQD YSTRPKSRTI 360
  361 TYSTSFCHQF HWVLKRTFRN LMLNPQTSVA QIGVMIFLAL VVGAIFFGVA ENSSGIQNRM 420
  421 GALFFITTNQ CFSSVSAAEL FIAERKLFVH EYISGYYRVS VYFLSKILSD ILTLRTIPAV 480
  481 IFSCVAYFMI GLKPAAEAFF IFLFSIIMVS YTATAMTLAI SADQTVVAIA NIFMTISFVF 540
  541 MMIFSGLLVN LPSVATWLNW LKYFSIPRYG LSALQINEFT GLFFCDNRNN SGSVCSSGEE 600
  601 FFQEQGIDYS AWGLWQNHLA LGIMTFIFLC IAYLKLRFIK KFT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle