YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63055728
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGIKLNLCL LCIFSCDVFA LSNGFIHNAY GSAYAGASAG AYKPLPGSYG SKHVPVYKPM  60
   61 NKIPTSYISK KSYPAPYKPK GYHPTNSYQP TYGSKTNYPP IYKPVAKKLS SYKAIKTTYL 120
  121 VYKAKTSYPP VYKHKITNPP TYKPKITYPP TYKPKPSYPP TYKPKPSYPP TYKAKKTYPS 180
  181 TYKPKPSYPP TYKPKITYPP TYKPKPSYPP SYKAKKSYPS TYKPKPSYPP TYKAKKTYPS 240
  241 TYKPKPSYPP TYKPKITYPP TYKPKPSYPP SYKAKKSYPS TYKPKPSYPP TYKPKITYPP 300
  301 TYKPKPSYPP TYKAKKTYPP TYKPKITYPP TYKPKPSYPT SYKSKKTYPP TYKPKITYPP 360
  361 TYKPKPSYPP SYKPKITYPP TYKPKKSYPP AYKSKASYPP SYQPKKTYLP SYKPKKTYPP 420
  421 TYKRKISYPP TYKTKPSYPS SYKRKTSYPS TYKRKTSYPP TYKPKISYPS TYKTKPSYPP 480
  481 TYKAKKTYPP TYKPKITYPP TYKPKPSYPT SYKSKKTYPP TYKPKITYPP TYKPKPSYPP 540
  541 SYKPKITYPP TYKPKKSYPP AYKSKASYPP SYQPKKTYLP SYKPKKTYPP TYKRKISYPP 600
  601 TYKTKPSYPA SYKRKTSYPS TYKRKTSYPP TYKPKISYPS TYKTKPSYPP TYKPKPSYAS 660
  661 SYKPKIRYPP TYKPKPSYAS SYKPKITYPP TYKPKISYPP TYKPKITYPP SYKPKISYLP 720
  721 AYKPKISYPS QY

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	732	0.99