YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39484
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPSAPPDE AESTIRSPDL PFVSSIVGGL FAGRAIVVSG MVLPGFASDR KRFQIDLCCG  60
   61 LLIDGDHMDN KALHFNPRFD AKTGWFSGPG DDKLVINSFV SGRWGNEERF DNPFKEGEPF 120
  121 QIRIMVFEKY FKISASGKHM CDFPHRVPVE SIRTISINGN IRVDYVEFHP PEDSMPTE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.37
Transmembrane Helix	21	47	0.68
Non-Cytoplasmic	48	178	0.54