YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83715781
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAGRNHHQS HGQRLRRLIP CILVVVFAVH AVSFALYLLL QPHHPPPNPG KPEAQTHERV  60
   61 QAPSPQKPWP RLPSLLPWTA DPSLPPRSCE AYFGNGFSRR VEVLPEGRGG GGWFLCHHSE 120
  121 TLGSSICEGA RVRLDPALMA MSRGGEPLDQ VMGRAEEEEL PKYEPGALQV EAAAKRRGPL 180
  181 VEPGFLDAHV PTNGIGMHTM RALLDSARVV PPLHCSQWVE EPTLLVTRFE YANLFHTITD 240
  241 WYSAYVSSRV TNLPDRPNVV FVDGHCKAPL EQTWEALFSN VTYIKSFSGP VCFRRAVLSP 300
  301 LGYETALFKG LSESFSCEGA SAQSLRNRPD HQKTARLSEF GEMIIASFDL LEDGIVPSKK 360
  361 TSTGLKVLFV RREDYLAHPR HSGKVESRLS NEQEVFGAVE KWAKKGQKCK INVVNGLFAH 420
  421 MSMKEQLQAI LEASVIIGAH GAGLTHLVSA TPDTKVLEII SSFYRRPHFA LISHWKALEY 480
  481 HAINLPGSYA SIPDVTSELS NILKGLGC

Type	Start	End	Confidence
Cytoplasmic	1	17	0.93
Transmembrane Helix	18	39	0.89
Non-Cytoplasmic	40	508	0.99