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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: COG8_BOVIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATATIPSS TTASATTTAT AAALGEVEDE GLLASLFRDR FPEAQWRERP DVGRYLRELS  60
   61 GSGLERLRRE PERLAEERAQ LLQQTRDLAF ANYKTFIRGA ECTERIHRLF GDVEESLGRL 120
  121 LDRLPSLQQS CRNFVKEAEE ISSNRRMNTL TLNRHTEILE ILEIPQLMDT CVRNSYYEEA 180
  181 LELAAYVRRL ERKYSSIPVI QGIVNEVRQS MQLMLSQLIQ QLRTNIQLPA CLRVIGFLRQ 240
  241 MDVFTEAELR VKFLQARDAW LRSILTAIPN DDPYFHITKT IEACRVHLFD IITQYRAIFS 300
  301 DEDPLLPPAM GEHMVNESAI FHGWVLQKVS QFLQVLETDL NRGIGSRLDS LLGQCMYFGL 360
  361 SFSRVGADFR GQLVPVFQQV AISTFQKAIQ EAVEKFQDEM NSYTLISTPA VLGSSALPAA 420
  421 APVTQPGTLQ PPMVLLDFPP LACFLNSILV AFNDLRLCCP VALAQEVTRA LEDALDKVTK 480
  481 VILAFHRAEE AAFSSGEQEL FVQFCTVFLE DLVPYLNRCL QVLFPPAQIA QTLGIPPTQL 540
  541 SKYGNLGHVN VSVVQEPLAF ILPKREPVFC LDKELVPELP APAPALPPNA PSPEPVTPVT 600
  601 PAVPDAGQEE VESAGPPQPD EPSAGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle