YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215704148, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAYALRGAA LVGVLLLVVA SPALVPVASA VPFIVLHGIG DQCENGGMAS FTEMLGEWSG  60
   61 SKGYCIEIGR GAWDSWLMPL QEQADTVCKK VKKMKELRKG YSIVGLSQGN LIGRAVIEYC 120
  121 DGGPPVKNFI SIGGPHAGTA SVPLCGSGIV CVLIDALIKL EIYSNYVQAH LAPSGYLKIP 180
  181 TDMTDYLKGC KFLPKLNNEI PSERNATYKQ RFSSLENLVL IMFEDDAVLI PRETAWFGYY 240
  241 PDGAFSPVQP PQKTKLYTED WIGLKALEEA GRVKFVSVPG GHLSISRSDT KKYIVPYLKP 300
  301 DGSSRFGIRR ILSD

Type	Start	End	Confidence
Signal Peptide	1	30	0.98
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	314	0.99