YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78708929, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLLARAPPP PPPLRHRGRL LPRFTSSSSP RRRRRPRAAR VRASGSDPPP QQQQQQVNLS  60
   61 VLRFTLGIPG LDESYLPRWI GLGFGALVLL NHLLSPSPTP AQLRSEALGL CLAAFSATLP 120
  121 YLGRFLEGAG AAERVPLPEG SRQVFAMSDS LSAAQKEDMA WASYVLLRNT NTTSVLISIG 180
  181 NQLCIRGYWD PPEDISKYAM IEWFKSQMQE AGIVDLREDL YFPTFSDTQL GKLLPQGILS 240
  241 VLAQPVLNNP DPTNSEIKAE GFILLASNSS YAYSEKHRVW IRTVANKFQC T

Type	Start	End	Confidence
Cytoplasmic	1	74	0.70
Transmembrane Helix	75	94	0.72
Non-Cytoplasmic	95	291	0.62