YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215697763, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPGSCPSS TSAAHSPVCL APSAAAGESQ EMVRPRMVLF GDSITEQSFR PGGWGAALAD  60
   61 TYSRKADVVV RGYGGYNTRW ALFLLHQIFP LVGIVPPLAT TVFFGANDAA LLGRTGERQH 120
  121 VPVAEYKENL KKIVNHLKDC SKSMLIVLIT PPPIDEDGRE RFARSLYGEE ARKLPERTNE 180
  181 MAGVYASQCI ELAREMNIHC IDIWSKMQET AGWQKLYLSD GLHLTPEGNA VVHKEVVQTL 240
  241 RSVGLKAEEM PYDFPHHSRI DGSCPEKAFQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.91
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	270	0.96