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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78708657
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEVCCCSGV LGGSPPSSRT AGVSSPGLSP SRPSKRRIGR ARVQPRAPPP CDERRAAEDV  60
   61 IHALRSADGP AEALERFRSA ARKPRVAHTT ASCNYMLELM RGHGRVGDMA EVFDVMQRQI 120
  121 VKANVGTFAA IFGGLGVEGG LRSAPVALPV MKEAGIVLNA YTYNGLVYFL VKSGFDREAL 180
  181 EVYRVMMVDG VVPSVRTYSV LMVAFGKRRD VETVLWLLRE MEAHGVKPNV YSYTICIRVL 240
  241 GQAKRFDEAY RILAKMENEG CKPDVITHTV LIQVLCDAGR ISDAKDVFWK MKKSDQKPDR 300
  301 VTYITLLDKF GDNGDSQSVM EIWNAMKADG YNDNVVAYTA VIDALCQVGR VFEALEMFDE 360
  361 MKQKGIVPEQ YSYNSLISGF LKADRFGDAL ELFKHMDIHG PKPNGYTHVL FINYYGKSGE 420
  421 SIKAIQRYEL MKSKGIVPDV VAGNAVLFGL AKSGRLGMAK RVFHELKAMG VSPDTITYTM 480
  481 MIKCCSKASK FDEAVKIFYD MIENNCVPDV LAVNSLIDTL YKAGRGDEAW RIFYQLKEMN 540
  541 LEPTDGTYNT LLAGLGREGK VKEVMHLLEE MYHSNYPPNL ITYNTILDCL CKNGAVNDAL 600
  601 DMLYSMTTKG CIPDLSSYNT VIYGLVKEER YNEAFSIFCQ MKKVLIPDYA TLCTILPSFV 660
  661 KIGLMKEALH IIKDYFLQPG SKTDRSSCHS LMEGILKKAG IEKSIEFAEI IASSGITLDD 720
  721 FFLCPLIKHL CKQKKALEAH ELVKKFKSFG VSLKTGLYNS LICGLVDENL IDIAEGLFAE 780
  781 MKELGCGPDE FTYNLLLDAM GKSMRIEEML KVQEEMHRKG YESTYVTYNT IISGLVKSRR 840
  841 LEQAIDLYYN LMSQGFSPTP CTYGPLLDGL LKAGRIEDAE NLFNEMLEYG CKANCTIYNI 900
  901 LLNGHRIAGN TEKVCHLFQD MVDQGINPDI KSYTIIIDTL CKAGQLNDGL TYFRQLLEMG 960
  961 LEPDLITYNL LIDGLGKSKR LEEAVSLFNE MQKKGIVPNL YTYNSLILHL GKAGKAAEAG1020
 1021 KMYEELLTKG WKPNVFTYNA LIRGYSVSGS TDSAYAAYGR MIVGGCLPNS STYMQLPNQL1080
 1081 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle