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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|162458849, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVPLPPLP AALAQYRPSA AATLGFRTPS SAPGVSASSS TRARRFSVIA SAREMPWPHV  60
   61 LTVAGSDSSA GAGIQADIKA CAALGAYCSS AITAVTAQNT VGVQGIHAVP EKFVGEQLRS 120
  121 VLSDMSVDVV KTGMLPSAGV VKVLCESLRK FPVKALVVDP VMVSTSGDTL SGPSTLATYR 180
  181 DELFSMADIV TPNVKEASKL LGDVSLHTIS DMRNAAESIY KLGPKYVLVK GGDMPDSSDA 240
  241 IDVLFDGKEF TELRGLRIKT RNTHGTGCTL ASCIAAELAK GATMLHAVQA AKKFVESALY 300
  301 HSKDLVIGNG PQGPFDHLFE LKSPSYKMGS LQKFNPDDLF LYAVTDSGMN KKWGRSIKDA 360
  361 VKAAIEGGAT IVQLREKDAE TREFLEAAKA CVEICKSLGV PLLINDRVDV ALACDAGGVH 420
  421 VGQSDIPAWE VRGLLGPGKI IGVSCKTLAQ AEQAWKDGAD YIGCGGVFPT TTKANNPTLG 480
  481 FEGLRTVCLA SKLPVVAIGG INAGNAGSVM ELGLPNLKGV AVVSALFDRE RVAAETRNLR 540
  541 SILMKNAHSR S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle