YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76556246, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTNAFCLA SPPLARICLH GDLQRFGRRL SLYVNTAAEA IRALSLQVPG FRRQMNEGWY  60
   61 QIRIAGDDTA PEAVYARLHE PLGEGTVIHI VPRLAGAGKG GLQIVLGAAA IVGSFFTAGA 120
  121 SMALWGSALA AGGFSATTML FSLGASMILG GVAQMLAPKP KTPEYRATDN GKQNTYFSSL 180
  181 DNMIAQGNPM PVPYGEMLVG SRRISQDIST RDEGGDGKVV VIGRQG

Type	Start	End	Confidence
Cytoplasmic	1	101	0.98
Transmembrane Helix	102	124	0.89
Non-Cytoplasmic	125	132	0.64
Transmembrane Helix	133	153	0.90
Cytoplasmic	154	226	0.97