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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113644761, gi...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLQRRGRG AAAATGCFFT FYAVFVIQTH PFLSLYSDMD IDLASYFKIT GSPFDTFSSS  60
   61 KIKMHVTTIL KSGEFSRQNN KSEIKSQLTS KPTLQSSQGI TDNFPSEQDF EHGAFKGPYV 120
  121 GFSDFGQSEM KGESSTQNKA GNKSQYPITI PKNPTLDSLK VITDNFSSKR EIGRGAFGVV 180
  181 YKGVLENGEV IAVKKLERTS GIHARRFQNE ANNLLELEHK NVVKLIGSCC QAERQVVEHD 240
  241 GKYVFTDVVE KLLCYEYLPN GSLDNYIYDE LNGIDWPTRF KIILGICNGL HFLHKERNEA 300
  301 IIHMNLKPSN ILLGDNMVPK IADFGLSRLF GQEQTRLITQ NVVGWIGYIA PEYYYRGEIS 360
  361 EKSDIFSLGI LILEIVTGLK NDSTSQEVSS RILIDNVRRK WLKSSQITSR YPSLEEDDIL 420
  421 QAKRCIESGL NCVETDPKKR PTISEIIVKL TDKGTEVKQG VLPNGELVAV KKLLDSVTAV 480
  481 NQDKQFQSEA GILIDLNHKN IVKLIGYCYE IRKEVVENNR KFFFVETPKK LLCYEYLPTG 540
  541 SLDKYIYGES NELKWDMRFK IIEGICQGLK FLHELKRPII HLDLKPGNVL LDDNMMPKIA 600
  601 DFGLSRLLGE EQTRTRTLTV VGSIGYIAPE YRYSGEISTK SDIFSLGVLI IEIVTGLKVN 660
  661 SSSQDVTSKG FIENVRNNWA KMPQIASNYP LLEANCLQEV KRCIDIALAC VDKNPKGRPS 720
  721 IGEIIDRLNW RKG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle