YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222615380, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATVSLSLV VSASGFPYPF PSPLSKTLAN PSSSTSLLLA ASLSRGATPL PLLRRDVSAA  60
   61 YGDDDMDDDF GDFDLDDGDG VGDDEDLDNE QDYDVDYDRL LAPVKAPPRP LSGEGDEEEG 120
  121 DIAMVAAQSF VSTQDSASDT VVDYSVNEDE FHKIRLLHCD FFIRKVPDPD DDVFDFREMY 180
  181 VTPPDTDIYS IPRVLAPMPQ KYVRCMKKNF GRYHVSEPPV EHLRDPLYKT EREIMKVFLT 240
  241 KHYRNRRCND PDFFLDFEEI YVIDSKARSI TRAKVVVSVP EGKKRDRRND LLLIRDGGES 300
  301 FRIIDKTKRD DATTVIQREE WAKSRQDVEK HFRKLRDFDY SNWF

Type	Start	End	Confidence
Signal Peptide	1	15	0.93
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	344	0.98