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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77556819, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.76
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRRGLLLV FVVVCFGGGG WLLPASRAMP LCTDSRPPVA LNKTLAFCAY ARGSSSCCDA  60
   61 AADATLQKQF DAFNVSDASC AALLKPILCA KCNPYSAELF NAGPNIRTIP FLCNSTSSSS 120
  121 AQSKDSTQDY CKLVWETCKD VTISNSPFQP PLQGGAPLPT SSSKLTDDWQ SEADFCKSFG 180
  181 GAPNDQSVCF SGNSVSFNTT PPSPSLKGIC LERIGNGSYL NMAPHPDGSN RIFLGSQPGK 240
  241 IWLATVPDQG SGGILQFDET SPFADLTDQV HFDSQFGLMG MAFHPNFATN GRFFASYNCD 300
  301 RTKSPSCSGR CSCNSDVGCD PSKVGTDNGA QPCQYQVVVS EYSAKGSSAN ISEVTSADPS 360
  361 EVTRIFTMGL PYTSQHGGQI LFGPTDGYLY LMMGDGGGKG DPFNFSQNKK SLLGKIMRLD 420
  421 VDNPPRQSEI ANQSLWGNYS IPKDNPYTDD SDLEPEVWAL GLRNPWRCSF DSARPSYFYC 480
  481 ADVGQDQYEE VDLISKGGNY GWRAYEGPLV FNPPSAPGGN TSLNSINAIP PIMGYSHSDV 540
  541 NKKIGSASII GGNVYRGSTD PCLVGRYLYA DLYASAMWTG TEAPESSGNY SSSLISFSCS 600
  601 KSSPIACDTA AGSPLPSLGY IYSFGEDNNK DTYVLSSKGV YRVVRPSLCG YTCPTEKPAT 660
  661 NTGTTTPSSA ASVTGKQMMG ALLLSVLMFW VLVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle