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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113649388, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTSSGANFH QQQPPPPTSS AAAAAGAAAV AQGMLPPRRP TGLQTSLSLA SSEQVGSPEM  60
   61 QEPGSNSDQG HDSATESASS RETWPAEPNH GSAAAVVAAS TAASGGGGVV GGIGVGVRIV 120
  121 DKEKEVGNGI PKLQVIRGSS RLDRMSLREV ARERVDLVAE KMKVMPEEHL EDMKNELRSI 180
  181 LEGTGGSHHI EEFLYLQKFV QSRGDLTQTM LSMAHHVQLE ILVAIKTGIQ AFLHPSVTIP 240
  241 QNRLVEVFLY KRCRNIACQS ALPAEECRCN VCSNRNGFCN LCMCVICNKF DFEVNTCRWI 300
  301 GCDFCSHWTH TDCAIRDGQI GMGQSIKSGT GHAEMLFRCQ ACQKTSELLG WVKDVFQQCA 360
  361 PGWDRDALLR ELEFVCKIFR LSEDSKGRKL FRKCADLIER LRNSPADAIN PRMILQVLQE 420
  421 LELDSPKSTE NEEIGRLITP QEACNRIAEV VHEAVKKMEL VAEEKMRLYK KARIAVEACD 480
  481 RELDEKAREL QELKAERLRK KQQVDELESI VRLKQAEAEM FQLKANEARQ EADRLQSIAL 540
  541 AKSERAEQDY ASLYLKRRLE EAEAEKQFLF EKIKYQETQR PMQASGSGAG DSSQTPMLSK 600
  601 IHDLLKNVRS IPPKTEGHQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle