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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|218186988
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSAGGDPP PPGLFAAALH ACSGASALEE HIHADDSNTI SDNTLEQLGF LDQESNDASV  60
   61 NTEKIQSSTP KCKSVEDIPI APAAKRCKNM DSKKLVPNSN NNSCLTGSQA PRKLPRKGDY 120
  121 PVQLRRNETF QDTKPPSTWI CKNAACKAVL TADNTFCKRC SCCICHLFDD NKDPSLWLVC 180
  181 SSETGDRDCC ESSCHIECAL QHQKVGCVDL GQSIQLDGNY CCAACGKVIG ILGFWKRQLM 240
  241 VAKDARRVDI LCSRIYLSHR LLDGTTRFKE FHKIVEDAKA KLETEVGPLD GTSSKMARGI 300
  301 VGRLPVAADV QKLCSLAIDM ADAWLKSNCK AETKQIDTLP AACRFRFEDI TTSSLVVVLK 360
  361 EAASSQYHAI KGYKLWYWNS REQPSTRVPA IFPKDQRRIL VSNLQPCTEY AFRIISFTEY 420
  421 GDLGHSECKC FTKSVEIIHK NMEHGAEGCS STAKRDSKSR NGWSSGFQVH QLGKVLRKAW 480
  481 AEENGCPSEA CKDEIEDSCC QSDSALHDKD QAAHVVSHEL DLNESSVPDL NAEVVMPTES 540
  541 FRNENICSPG KNGLRKSNGS SDSDICAEGL VGEAPAMESR SQSRKQTSDL EQETYLEQET 600
  601 GADDSTLLIS PPKHFSRRLG QLDDNYEYCV KVIRWLECSG HIEKDFRMKF LTWFSLRSTE 660
  661 QERRVVITFI RTLADDPSSL AGQLLDSFEE IVSSKKPRTG FCSKLWH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle