YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215686742, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLLPASPPP LSLSRSLAAA AAASRRGRAV TCAAARGAAS SSSASFDAAG FEAERLRLDA  60
   61 EARAGMASAA AVAGAEAADP KAWKWAIRKR VWDALEAEGV ARDPRPVHHR IPNFDGAAAA 120
  121 ADSLGRLDVF QDAQCVKVNP DSPQKQVRFL TLSGDKKLLT PQPRLRTGFF SVLESHMIPI 180
  181 GCIPEACTSV GAAKYGRPIG LDEKIKVDLI VIGSVAVDPS TGARLGKGEG FAELEYGMLR 240
  241 YMGSISDSTM IVTTVHDKQL VNDIPVEKLL VHDVPVDIIC TPTQVIFTNT TIAKPQGIYW 300
  301 EKLSPEKLGQ IRILQELKRR IESETGTTLP CGPSEKLPPT AQRRRRKRRR

Type	Start	End	Confidence
Signal Peptide	1	34	0.88
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	350	0.99