YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82581097
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVVFPFFFVN IFVALIIITF QEQGDKMMEE YSLEKNERAC IDFAISAKPL TRHMPQNKQS  60
   61 FQYRMWQFVV SPPFEYTIMA MIALNTIVLM MKFYGASVAY ENALRVFNIV FTSLFSLECV 120
  121 LKVMAFGILN YFRDAWNIFD FVTVLGSITD ILVTEFGNPV GVTSF

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.33
Transmembrane Helix	6	21	0.64
Cytoplasmic	22	72	0.52
Transmembrane Helix	73	96	0.82
Non-Cytoplasmic	97	105	0.46
Transmembrane Helix	106	126	0.87
Cytoplasmic	127	135	0.44
Transmembrane Helix	136	154	0.57
Non-Cytoplasmic	155	165	0.52