YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82581095
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLTLFTVSTG EGWPQVLKHS VDATFENQGP SPGYRMEMSI FYVVYFVVFP FFFVNIFVAL  60
   61 IIITFQEQGD KMMEEYSLEK NENNFINLSF LRLFRAARLI KLLRQGYTIR ILLWTFVQSF 120
  121 KALPYVCLLI AMLFFIYAII GMQVFGNIGI DGEDEDSDED EFQITEHNNF RTFFQALMLL 180
  181 FRSATGEAWH NIMLSCLSGK PCDKNSGIQK PE

Type	Start	End	Confidence
Cytoplasmic	1	40	0.71
Transmembrane Helix	41	63	0.95
Non-Cytoplasmic	64	121	0.64
Transmembrane Helix	122	141	0.94
Cytoplasmic	142	212	0.66