YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82658268, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALHIGRAAY RRQSVLGISR LLLSAVPWCQ SSQRSHHAPG TTLKYIPRRA VLYVPGNDER  60
   61 KLQKLASLDV DCAVLDCEDG VALNKKDAAR ETVPKMLAEL DLGRTEKCVR VNSVSSGLAE 120
  121 ADMEVILQSD VLPTALMLPK VEDTGEVLWF VDRFQQYLKG RELEEPIRLV TFVETAVGLL 180
  181 NFKAVCEALR DLGPKAGFHH DGVVFGSDDF CASIGATRTK DAKELLYARQ KVVVTTKAFG 240
  241 LQAIDLVYID YKDVEGLRQQ AREGALMGFT GKQVIHPNQI KAVQEEFAPS PERIKWATEL 300
  301 IAAFEEHQKL GKGAFTFHGS MIDMPSLKQA QNIVTMASTV QGK

Type	Start	End	Confidence
Signal Peptide	1	31	0.93
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	343	0.99