YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73535962, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGTTAKEEME RFWNKNLGSN RPLSPHITIY RWSLPMAMSI CHRGTGIALS AGVSLFGLSA  60
   61 LLLPGNFESH LELVKSLCLG PTLIYTAKFG IVFPLMYHTW NGIRHLIWDL GKGLTIPQLT 120
  121 QSGVVVLILT VLSSVGLAAM

Type	Start	End	Confidence
Cytoplasmic	1	39	0.84
Transmembrane Helix	40	63	0.88
Non-Cytoplasmic	64	78	0.72
Transmembrane Helix	79	100	0.78
Cytoplasmic	101	117	0.62
Transmembrane Helix	118	139	0.87
Non-Cytoplasmic	140	140	0.74