YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71064095
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSTAVTTL ISSGAIVSAL PHVDVHQEDA HQHKRAVAYK YVYETVVVDS DGHTVTPAAT  60
   61 SAIITTSVLA PTSSAAAADS SASIAVSSAA LAKNEKISDA AASATASTSQ GASSSSSSSS 120
  121 ATSTLESSSV SSSSEEAAPT STVVSTSSAT QSSASSATKS STSSTSSSSS SSSSSSSSSS 180
  181 SGSGSIYGDL ADFSGPSEKF QDGTIPCDKF PSGQGVISID WIGEGGWSGV ENTDTSTGGS 240
  241 CKEGSYCSYS CQPGMSKTQW PSDQPSDGRS VGGLLCKNGY LYRSNTDADY LCEWGVEAAY 300
  301 VVSKLSKGVA ICRTDYPGTE NMVIPTYVEG GSSLPLTVVD QDTYFTWEGK KTSAQYYVNN 360
  361 AGVSVEDGCI WGTSGSGIGN WAPLNFGAGS TGGVTYLSLI PNPNNSDALN YNVKIVAADD 420
  421 SSNVIGECVY ENGEFSGGAD GCTVSVTSGK AHFVLYN

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	457	0.99