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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114226536, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNATLMDNLR SVGPLGLGTP LLVVALLMML VVPLPPIGLD LLFTFNIVLS LSILLVTVYA  60
   61 MRPLDFAVFP TILLIATLLR LALNVASTRI ILLDGHTGTA AAGRVIESFG EFVIGGNYAV 120
  121 GLVVFTILII INFVVVTKGA GRVAEVSARF TLDALPGKQM AIDADLNAGI IDQKQAKERR 180
  181 EEVAREADFY GSMDGASKFV RGDAIAGILI LVINLVGGLS IGMLQHDMIF GDAVRNYSLL 240
  241 TIGDGLVAQI PSLVLSTATA IIVTRVADSQ KMSDAVTGQL FSNPRVLWVV GGVIFFLGLI 300
  301 PGMPLLPFAF FGTVCLTAAY LITQRQKEVA EAEAQAGAKA SGEQAEAKSP EQRELSWDDV 360
  361 PPVDVVGLEV GYGLIPMVDR NQGGQLLTRI KGVRKKLSQD LGFLIQPVHI RDNLDLGPNT 420
  421 YRISIKGVPV AEAEVQPGRE LAINPGSVQG QVKGIPTKDP AFGLEAVWIE PSQRDYAQTL 480
  481 GYTVVDTSTV IATHLSQLVQ QNAHRLLGHE EVQKLLDILA QSQPKLVEEV VPNTLPLSVV 540
  541 VKVLQNLLEE RIPVRDMRSI VEILAEYGAR SKDPAQLTQA AREALGRQIV QNIAGMTREL 600
  601 PVMTLDPQLE QMLLNAIQGG GETSGGFEPG LAERLQQSLA DTTRKQEMAG QPAVLLTSPQ 660
  661 LRSWLQRLIR HSVPSLHVLS YNEIPDDRQV RIVATVGQQQ QVGGGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle