YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78514742, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSTRRLISA AARRENVISR MRRGSAPLTS RCATRCASVL VLPEPAPAMI SSGGPGAAQA  60
   61 PPCSTARRCS GLRSSRYVAA TACTNRPSIC ENPRFAAPTQ RHGAVAAAFY MIRNRSFLPR 120
  121 LPTERQPAAC AGARGLLSNQ PRHESRKNTV SNFASIIAAE LSVRDAQVQA AIDLLDGGAT 180
  181 VPFIARYRKE ATGMLDDTQL RTLEERLRYL REMDARRTAI IESIKSQGKM TPEIELALAT 240
  241 ADTKARLEDI YLPFKEKRRT KAQIAKEAGL EPLADMLIGD PMKNPEDEAK AFIKKDGDNP 300
  301 VKDVKAALDG ARAILVERFA EHADLVGSLR EEMWTRGAVK STVRHGKKTE GAKFADYFDF 360
  361 SEPFTKLPSH RILAMLRGEK EDVLQLDFGD GEPEDSKDPS LYENRIAVTF GISRQGRPAD 420
  421 QFLSDSVRWA WRTRIKTSLA LDIRMRLWQE AEKEAVRVFA ANLRDLLLAA PAGGRATLGL 480
  481 DPGFRTGVKV AVIDRTGKFV DHATIYPHEP QRQWNESMLT LAQLCIKHRI ELVAIGNGTA 540
  541 SRETEKLVND LMKLKPDLKL TKAIVSEAGA SVYSASEFAA KEFPNLDVSI RGAVSIARRL 600
  601 QDPLGELVKV PPASIGVGQY QHDLNQYELA RALDATVEDC VNAVGVDLNT ASAPLLARVS 660
  661 GIGESLAQNI VAHRDANGPF PTRDKLKDVP RLGPKAFEQC AGFLRIRDGD NPLDASGVHP 720
  721 ESYPVVKKIL ETTKSDIKVL IGDSKTLKTL NPAKFADERF GVPTVTDIIK ELEKPGRDPR 780
  781 PEFKTATFQE GVEKITDLKP GMILEATVTN VAAFGAFADI GVHQDGLIHI SAMSEKRIND 840
  841 PREVVKPGQV VKVKVLDVDV PRNRISLTLR LSDPLPPKGE KRTSARPPAA ARMTTREEKP 900
  901 AGGGAFAAAM AKAVERRKGA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle