YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78514671, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSFPVTKT GLRFGLATAL AGSLALSLLV APARAADDAN PVLAKVNGAE IRKSDVTLAE  60
   61 EELGPSLAQM DPATKDDNVL SFLIDMKLVA KAAEDKKVAD SEEFKKRLAF TRNRLLMDSL 120
  121 LASEGKAATT PDAMKKVYEE ASKQIGGEQE VHARHILVET EDEAKAVKAE LAKGGDFAEL 180
  181 AKKKSKDPGA SDGGDLGFFT KEQMVPEFAN VAFALEPGKI SDPVKTQFGW HIIKVEEKRN 240
  241 RKPPEFDQVK SQIETYVTRK AQADYVSKLR EAAKIERLDK PAAEAAKPAD AKPAEPAKK

Type	Start	End	Confidence
Signal Peptide	1	35	0.99
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	299	0.99