YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78517423, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRGILAGL GATALMSALP ARGWAAASIK PDETSALLVI DVQNFFLPGG SLAVKDGEQV  60
   61 VPIINRIAKA FSNVVLTQDW HTPAHVSFAS SHAGKKPFEL VDLAYGKQVL WPDHCVQGTE 120
  121 GAALSKDLAI PQAELIIRKG FHNAVDSYSA FTEADGKTTT GLAAYLQARG ITRVFVAGLA 180
  181 TDFCVAWTAL DARKAGLETY VVEDACRGID TQGSLAKAWT DMAAAGVKRI SSEDIAA

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	237	0.99