YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78694123, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRRRALGL LASAVPSVAA VRFASAAEYP ARPVRFVVGY PPGGATDILA RLIGQRLSET  60
   61 LGQQFVVENK PGAGNNIGTE SVVNAAADGY TVLLVNPANY INASLYTNLK FNFVRDIAPV 120
  121 ASFNRVPNVM TVNNDIKAKT VAEFIAYLKE NPGKVNMASS GNGTSVHLSG EMFMAMTGTK 180
  181 MQHVPYRGAA PAITDMLGGQ VQVIFDNMPS IIQHIRSGSL RALGVTTQER SAQLPDVQAI 240
  241 AETVPGYEAS ALFGMGAPKN TPKEIIEKLN KQVNVVLAEP EIKKKLVDLG GEPLIQSPDQ 300
  301 FGAQIVAETD KWKKVVEFAG LKLD

Type	Start	End	Confidence
Signal Peptide	1	26	0.92
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	324	0.99