YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148253777, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFNESDQAS LSRRVALAAG AALATAPLLT STPATAKSSA DHGAQRSSTP AFITTKDGTK  60
   61 IAYKDWGKGQ PILFSHGWPL AGDAWDAQML FFGQKGFRVI AHDRRGHGSS DQPWDGNTMD 120
  121 QYADDLAELI EKLDLTDLVL VGHSTGGGEV AHYIGRHGSK RVAKVVLVGA VPPLMLKTEA 180
  181 NPDGTPLQVF DDIRKGTATN RAQFFKDLTI PFYGFNRPGA KVSEGLREQF WRLGMQGGIK 240
  241 GEYDCIHEFS EVDYTADLKK IDKPTLVIHG DDDQIVPIAA SAAKTAKIVK DAQLKIYKGG 300
  301 AHGLAQVDPD TFNADLLAFI RS

Type	Start	End	Confidence
Signal Peptide	1	36	0.99
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	322	0.99