YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78692406, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLDLSQFND IDFENIGGWP NQVKVFFAVL LALCVFAAGY FLVVSDAIDV YNAEQRKEEQ  60
   61 LREDFKTKYQ LAANLKLYRE QLAVMEEQFA ELLKMLPSEN EMPGLLDDLT FVATDAGLRI 120
  121 KSLNWEPEIQ RDFYIEFPIK MSVTGDYHQI GNMVSGVAKL PRIVSLHDFT IKRDESGNLA 180
  181 MDILAKTYRF KEGAELPPEK PANNKGKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	24	0.57
Transmembrane Helix	25	44	0.90
Cytoplasmic	45	208	0.54