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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LPXB_SHESR
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKSQLVFA MVAGELSGDI LGAGLMAALQ KTHPNARFVG IGGPRMEALG FESLFAMEEL  60
   61 AVMGIVEVLS RLPRLLHVRS SLIKSITELK PDCFIGIDAP DFNIGLELKL KAQGIKTVHY 120
  121 VSPSVWAWRP KRIFKIAKAT NMVLSLLPFE KAFYDKHQVP CTFVGHTLAD DIPLESDKAS 180
  181 ARQLLELDPD AEYLAILPGS RGGELKQLAE PFVKAALLIK QQFPDIRFVT PLVNQKRREQ 240
  241 FEQALKAHAP DLEIHMVEGK SREVMAAADG ILLASGTATL EAMLIKRPMV VAYRVSPLTY 300
  301 EIAKTMMQVN RFSLPNLLAG RDVVPELIQH DCTPEKIAAA VGVELNRDFA PIKAEFERLH 360
  361 QLLRCDASQK AAEAVLALVD AKELN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle