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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78508897, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTIAATAI LLALGLTACS DAPKTNAVPS SSTAEQAKPN QLTQAQLQQF GDTLGVSYRV  60
   61 LTNRSDDSCD KAAAEGRCFV AEIDLVPEVE LKSRDWAIYF SQMRPVQAVE SKEFSVTHIK 120
  121 GDLYRIAPTE AFSGFSKSEK KTLRFRGELW QLSETDAMPN YYIVAGDLSP VVIASTQVQQ 180
  181 DPETLMEVRP YVEAYTDMVK QYRRTDADKL APATPTQLFS NNQQVSEDAS LAVNTIIPTP 240
  241 QKVAIHSQDK AVSLNSGIKL DFGSVTNASA AQQPLDPKHL AAALSRLARL GVNESEHGVA 300
  301 VKLNWRQGAE GSYLLDIKAD AIEIAAADAA GFSYALSSLA SLIDVQDLRV NTMTIEDSPR 360
  361 YSFRGMHIDV ARNFHSKALI FDLLDQMAAY KLNKLHLHMA DDEGWRLEID GLHELTDIGS 420
  421 KRCHDLEENT CLLPQLGSGP FADVPVNGFY SKQDYIDIVK YADARQIQVI PSMDMPGHSR 480
  481 AAIKSMEARY RKLVAEGKAE EAKTYLLSDA ADTTVYSSVQ YYNDNTLNVC MESTYLFVDK 540
  541 VIDEIAKLHQ AAGQPLTRYH IGADETAGAW KQSPACLDFV ANNDKGVKSI DDLGAYFIER 600
  601 ISNQLASKGI EAAGWSDGMS HVRPSNMPAK VQSNIWDVIA YKGYEHANQQ VNNGWDVVLS 660
  661 NPEVLYFDFP YEADPKEHGY YWASRAINAH KVFSFMPDNL VANAEQWTDI QNLPFEADDR 720
  721 ARTDEKGKQS GPREQGKAFA GLQGQLWSET IRSDNTVEYM IFPRLLMLAE RAWHQAAWEV 780
  781 PYQYQGALYN QTTGHFTAAM REAQAQSWQQ MANTLGHKEF IKLDKAGIDY RVPTVGAEIR 840
  841 DGKLFANVAY PGLKIEWRQA SGQWQSYQAG QAVTGPVEIR AIAADGKRKG RSLVVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle