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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78691525, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISCLFTYQF ENRLVFSLAR ISSLISLNIR PQNVRHTLTS LFSLILSSVI VSAASLFMAP  60
   61 THADDTELYV FEASARNGSR PQVLIIFDNS GSMSNLAYDV EAPYENKRAV NYAQSGNLFY 120
  121 SRGSSENAAA PNPNSGREKR KFSGGLNGCE SSWEYLNRYG TFTGFFREYG FSGSSGSWRE 180
  181 FSELNGSSIS AVDCFEDIQE NKFGNAAGEA QGLPVDSLGT ASKPVRYTEA STSSSDNVKS 240
  241 AAKAKAEKTA FGTGKVVTVY TEDYLNWLHG PKTRVNKTRL ALAKDAIESV ILTTPGVDFG 300
  301 LAIFNMNGPY DGQRDGGRII SGIKPMSAAA KIDLLKGVND INYAQNTPLC ETLYEAYRYF 360
  361 GGQSQYFGDD DSDYDYFDRW GRYLGTYQAS RNSFTDPEAL VVGTNNYNSP FKRCQNEAYI 420
  421 IYITDGEPTL DNAADGLVEQ LTKGVGKHTS RPVSYLSALS GWMRNEDVNP NSVGKQTVRT 480
  481 FTIGFSEGAA NAEHLLKQTA ENGGGKYFDA TDASKLRSSL QTALNNILEK NASFTSPSVA 540
  541 SNNFNRTQTF DSAYYSMFLP NKGPRWLGNI KKFKVTSSGD VVDSKGNNAI GEDGNIKAEA 600
  601 CSYWTSAEEC GASGDGNDVK RGGVLGAMQQ ASSRTLYSNL GTGLSPFTLS NASRKAGGDA 660
  661 RLALYMGVDE TELSEHFDWA KGIDVDNDKN QDLSAASGAT PNWRADIMGD ALHSKPLALN 720
  721 FGSEDQPDIR IIVGTNHGVL HMFKDEGDSV SETWGFIPYE LLPNFRDLKA NAPTGVHSVY 780
  781 GIDGSPVAYT KMQGKRIEKA WVFVGMRRGG NAYYALDITS PDNPTFMWRI DASSPGMGEL 840
  841 GQSWSTPVVT TIPSATGDKP VLIFGAGYTP ATKDGAEIGS DDSRGRGVFI IDAETGALIH 900
  901 QFGGSGANTQ LPGIANSIPS SVAVLDGNGD GRTDRIYATD TQGNVWRMDM PTANTSTWSG 960
  961 FKFAALGDRS SVASDRRFFS GPTVAQTIIT NTFELTQVVN GKSTKTVTTQ NIPYDAVVVG1020
 1021 SGHRAKPSDV SRSDMFFALQ DRNIVTQSFQ GKPNQKPVPS ALTLSDLYDV TTAAPSNQAS1080
 1081 EIAFGQKRGW YYDFSRKGEK SLSSATIVQG EVYFTSFVPG SDASVNQCLS SGKGYLYKKN1140
 1141 LHKGTNGYRT DFLYAGELVL DTPQLVIPPA AQPDDPNAKA PTPDMFLIGI GKAVPEEATC1200
 1201 ESGNPKCIGS GPKANKIYYY VDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle